There are Croatia Airlines flights from and to Vienna Airport in the table below.
| Destination | Flights | Distance |
|---|---|---|
| Alexander the Great (Skopje) - Vienna Schwechat | OU9443 | 793 km |
| Vienna Schwechat - Butmir (Sarajevo) | OU9441 | 498 km |
| Dubrovnik Airport (Dubrovnik) - Vienna Schwechat | OU9442 | 634 km |
| Frankfurt (Frankfurt) - Vienna Schwechat | OU415 | 620 km |
| Vienna Schwechat - Leos Janacek Ostrava Airport (Ostrava) | OU9443 | 209 km |
| Vienna Schwechat - Pleso (Zagreb) | OU415 | 268 km |
| Pleso (Zagreb) - Vienna Schwechat | OU440 | 268 km |
| Vienna Schwechat - Pleso (Zagreb) | OU441 | 268 km |
| Pleso (Zagreb) - Vienna Schwechat | OU442 | 268 km |
| Vienna Schwechat - Pleso (Zagreb) | OU443 | 268 km |
| Vienna Schwechat - Pleso (Zagreb) | OU673 | 268 km |
| Vienna Schwechat - Pleso (Zagreb) | OU1523 | 268 km |
| Vienna Schwechat - Pleso (Zagreb) | OU1527 | 268 km |
| Vienna Schwechat - Pleso (Zagreb) | OU7443 | 268 km |
| Pleso (Zagreb) - Vienna Schwechat | OU7444 | 268 km |
| Pleso (Zagreb) - Vienna Schwechat | OU8446 | 268 km |
| Vienna Schwechat - Pleso (Zagreb) | OU8447 | 268 km |
| Pleso (Zagreb) - Vienna Schwechat | OU9202 | 268 km |
| Vienna Schwechat - Pleso (Zagreb) | OU9203 | 268 km |
| Pleso (Zagreb) - Vienna Schwechat | OU9440 | 268 km |
| Pleso (Zagreb) - Vienna Schwechat | OU9442 | 268 km |
| Vienna Schwechat - Pleso (Zagreb) | OU9444 | 268 km |
| Vienna Schwechat - Pleso (Zagreb) | OU9460 | 268 km |
| Pula Airport (Pula) - Vienna Schwechat | OU673 | 412 km |
| Rafic Hariri International Airport (Beirut) - Vienna Schwechat | OU1521 | 2240 km |
| Rafic Hariri International Airport (Beirut) - Vienna Schwechat | OU1525 | 2240 km |
| Split Airport (Split) - Vienna Schwechat | OU444 | 511 km |
| Vienna Schwechat - Split Airport (Split) | OU445 | 511 km |
| Vienna Schwechat - Split Airport (Split) | OU1523 | 511 km |
