There are SmartLynx Airlines Estonia flights from and to Vienna Airport in the table below.
| Destination | Flights | Distance |
|---|---|---|
| Vienna Schwechat - Düsseldorf International (Dusseldorf) | 6Y9471 | 787 km |
| Vienna Schwechat - Novo Alexeyevka (Tbilisi) | 6Y8525 | 2338 km |
| Vienna Schwechat - Riga International (Riga) | 6Y8527 | 1100 km |
| Riga International (Riga) - Vienna Schwechat | 6Y9525 | 1100 km |
| Vienna Schwechat - Sur Reina Sofia (Tenerife) | 6Y571 | 3617 km |
| Ulemiste (Tallinn) - Vienna Schwechat | 6Y571 | 1367 km |
